Afternoon Practicals
- Differential expression analysis of microarray experiments
- Analysis of Illumina Data: The lumi package and the nuID naming scheme for oligonucleotides
- Efficient manipulation of large biological sequences with the Biostrings package
- Gaggle: broadcast data from R to interactive programs & websites
- Distributed R and Bioconductor for the Web
- Analysing Illumina bead-based data using beadarray
- Flow Cytometry Analysis with R: the flowCore package
- Integrating Bioconductor Packages in the Analysis of Affymetrix Data
- Microarray data quality metrics
- Analysis of small to very large Affymetrix data sets
- Database mining with biomaRt
- Analysis of Affymetrix and Nimblegen data and extension of BioConductor tools using the oligo package
- Machine learning for high-throughput biology
- Image processing and analysis with EBImage (applied to cytomicroscopy)
- Exposing Bioconductor functionality as web services